From 8abec7206a5239eca33cbdbe7d08c489b9560981 Mon Sep 17 00:00:00 2001 From: Sujen Shah <sujen1412@gmail.com> Date: Thu, 1 Apr 2021 09:56:37 -0700 Subject: [PATCH] Update base dockerfile and run command --- algorithm_config.yaml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/algorithm_config.yaml b/algorithm_config.yaml index a209a5d..dc54d16 100644 --- a/algorithm_config.yaml +++ b/algorithm_config.yaml @@ -4,7 +4,7 @@ algo_name: reads2 version: master environment: ubuntu repository_url: https://repo.uat.maap-project.org/maap-dev/readstwo.git -docker_url: kosted/bmap-stack:latest +docker_url: mas.uat.maap-project.org/root/readstwo:latest # queue chosen when registering queue: 15GB @@ -12,9 +12,9 @@ queue: 15GB # explain what this algorithm does description: # path to the wrapper script for running the algorithm -run_command: readstwo/run.sh +run_command: /projects/readstwo/run.sh # set a storage value in GB or MB or KB, e.g. "100GB", "20MB", "10KB" disk_space: 10GB inputs: # remove below this line if no inputs -# rename and set algorithm input names accordingly \ No newline at end of file +# rename and set algorithm input names accordingly -- GitLab