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# Copyright (c) 2012-2018 Red Hat, Inc.
# This program and the accompanying materials are made
# available under the terms of the Eclipse Public License 2.0
# which is available at https://www.eclipse.org/legal/epl-2.0/
#
# SPDX-License-Identifier: EPL-2.0
#
# Capgemini modified the first verion of this dockerfile
# for Biomass Project
# Contributors:
# Red Hat, Inc. - initial API and implementation
# Capgemini for Biomass project
#FROM eclipse/ubuntu_python
FROM quay.io/eclipse/che-python-3.7:nightly
#FROM python:3.7
LABEL maintainer="teddy.kossoko@capgemini.com"
LABEL version="1.0"
LABEL description="Docker file based on ubuntu for eclipse-che workspaces for Biomass project"
RUN apt-get update \
&& apt-get install -y sudo
#RUN adduser --disabled-password --gecos '' docker
#RUN adduser docker sudo
#RUN echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers
#USER docker
# this is where I was running into problems with the other approaches
RUN sudo apt-get update
#RUN apt update && apt install sudo && \
# adduser maapuser && \
# usermod -aG sudo maapuser
#USER root
RUN python --version
#RUN chmod 777 /etc/apt/sources.list
RUN sudo apt-get update
RUN sudo apt-get clean
# Installation of pip, gdal, python3, matplotlib, doxyen
# installation of scikit-learn, pandas, geopandas, fiona, shapely
RUN pip3 install --upgrade pip
#RUN sudo apt-get clean
RUN apt-get install -y --no-install-recommends rsync software-properties-common python3-lxml python3-pip python3-dev gdal-bin libgdal-dev octave && \
#apt-get install -y software-properties-common python-software-properties python3-lxml python3-pip &&\
pip3 install scipy && \
pip3 install matplotlib && \
pip3 install property && \
pip install pillow && \
pip install -U scikit-learn && \
pip install pandas && \
pip install --user fiona && \
pip install Shapely && \
pip install opencv-python && \
pip install octave_kernel && \
apt-get -y install jq && \
apt-get -y install gcc && \
# apt-get install g++ && \
apt-get install gdal-bin && \
apt-get install libgdal-dev && \
apt-get install -y unzip && \
pip install conda && \
apt-get install -y git && \
git clone https://github.com/geopandas/geopandas.git && \
cd geopandas && \
pip install .
RUN export CPLUS_INCLUDE_PATH=/usr/include/gdal
RUN export C_INCLUDE_PATH=/usr/include/gdal
#RUN pip install GDAL
# install gdal and matplotlib with CONDA
#RUN conda install -y gdal
#RUN easy_install GDAL
#RUN pip install --global-option=build_ext --global-option="-I/usr/include/gdal" GDAL==`gdal-config --version`
# We add the script folder and the zip file to be able to unzip the structure of the project
COPY initTemplate.sh /usr/bmap/initTemplate.sh
COPY initCredentials.sh /usr/bmap/initCredentials.sh
COPY Project_template.zip /usr/bmap/Project_template.zip
COPY shareAlgorithm.sh /usr/bmap/shareAlgorithm.sh
COPY .gitlab-ci.yml /usr/bmap/.gitlab-ci.yml
# We add the RestClient file
COPY RestClient.py /usr/bmap/RestClient.py
COPY quicklook_raster.py /usr/bmap/quicklook_raster.py
COPY ingestData.py /usr/bmap/ingestData.py
COPY maap-s3.sh /usr/bmap/maap-s3.sh
RUN chmod +x /usr/bmap/initTemplate.sh
RUN chmod +x /usr/bmap/shareAlgorithm.sh
RUN chmod +x /usr/bmap/ingestData.sh
RUN chmod +x /usr/bmap/maap-s3.sh
ENV PATH="/usr/bmap/:${PATH}"
ENV PYTHONPATH="/usr/bmap/:${PYTHONPATH}"
ENV PATH="/usr/modules/:${PATH}"
ENV PYTHONPATH="/usr/modules/:${PYTHONPATH}"
#We add env variable to request the back end
ENV BMAP_BACKEND_URL=http://backend-val.biomass-maap.com/bmap-web/